Britta Velten
| Snapshot Date: 2026-05-18 13:45 -0400 (Mon, 18 May 2026) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: devel |
| git_last_commit: ba611e2 |
| git_last_commit_date: 2026-04-28 08:49:19 -0400 (Tue, 28 Apr 2026) |
| Back to Multiple platform build/check report for BioC 3.24: simplified long |
|
This page was generated on 2026-05-19 12:54 -0400 (Tue, 19 May 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.4 LTS) | x86_64 | 4.6.0 RC (2026-04-17 r89917) -- "Because it was There" | 4898 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | 4.6.0 Patched (2026-05-01 r89994) -- "Because it was There" | 4617 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 932/2377 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.29.0 (landing page) Britta Velten
| nebbiolo2 | Linux (Ubuntu 24.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | OK | OK | | |||||||||
| See other builds for graper in R Universe. | ||||||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.29.0 |
| Command: /home/biocbuild/bbs-3.24-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.24-bioc/R/site-library --timings graper_1.29.0.tar.gz |
| StartedAt: 2026-05-19 00:32:39 -0400 (Tue, 19 May 2026) |
| EndedAt: 2026-05-19 00:34:16 -0400 (Tue, 19 May 2026) |
| EllapsedTime: 97.3 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.24-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.24-bioc/R/site-library --timings graper_1.29.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.24-bioc/meat/graper.Rcheck’
* using R version 4.6.0 RC (2026-04-17 r89917)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
gcc (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0
GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0
* running under: Ubuntu 24.04.4 LTS
* using session charset: UTF-8
* current time: 2026-05-19 04:32:39 UTC
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.29.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0’
* checking installed package size ... INFO
installed size is 6.2Mb
sub-directories of 1Mb or more:
libs 6.0Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... INFO
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: 1 NOTE
See
‘/home/biocbuild/bbs-3.24-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.24-bioc/R/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.24-bioc/R/site-library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.29.0’ ** using staged installation ** libs using C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0’ g++ -std=gnu++20 -I"/home/biocbuild/bbs-3.24-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.24-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.24-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.24-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++20 -I"/home/biocbuild/bbs-3.24-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.24-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.24-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.24-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c fit_graper.cpp -o fit_graper.o g++ -std=gnu++20 -shared -L/home/biocbuild/bbs-3.24-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.24-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.24-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.24-bioc/R/site-library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.6.0 RC (2026-04-17 r89917) -- "Because it was There"
Copyright (C) 2026 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-881.958
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-573.586
ELB improved by 308.372
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-512.053
ELB improved by 61.5335
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-480.734
ELB improved by 31.3192
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-468.58
ELB improved by 12.1537
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-462.011
ELB improved by 6.56879
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.814
ELB improved by 5.19728
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.029
ELB improved by 4.78501
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.471
ELB improved by 4.55759
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.188
ELB improved by 4.28358
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.281
ELB improved by 3.9067
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.851
ELB improved by 3.43017
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.984
ELB improved by 2.86651
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.667
ELB improved by 2.31764
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.776
ELB improved by 1.89061
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.212
ELB improved by 1.56371
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.989
ELB improved by 1.2233
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.103
ELB improved by 0.885867
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.466
ELB improved by 0.636569
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.988
ELB improved by 0.478179
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.609
ELB improved by 0.379706
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.292
ELB improved by 0.316258
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.019
ELB improved by 0.273344
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.776
ELB improved by 0.243298
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.553
ELB improved by 0.222273
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.345
ELB improved by 0.208572
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.143
ELB improved by 0.201817
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.941
ELB improved by 0.202307
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.731
ELB improved by 0.209739
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.51
ELB improved by 0.220762
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.283
ELB improved by 0.227645
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.059
ELB improved by 0.22308
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.852
ELB improved by 0.207288
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.666
ELB improved by 0.186538
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.499
ELB improved by 0.166482
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.35
ELB improved by 0.149403
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.215
ELB improved by 0.135271
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.091
ELB improved by 0.123338
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.978
ELB improved by 0.11297
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.874
ELB improved by 0.103824
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.779
ELB improved by 0.0957532
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.69
ELB improved by 0.0886747
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.607
ELB improved by 0.0824983
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.53
ELB improved by 0.0771152
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.458
ELB improved by 0.0724135
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.39
ELB improved by 0.0682939
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.325
ELB improved by 0.064677
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.263
ELB improved by 0.0615022
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.205
ELB improved by 0.0587245
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.148
ELB improved by 0.0563105
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.094
ELB improved by 0.0542357
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.042
ELB improved by 0.0524828
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.991
ELB improved by 0.0510412
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.941
ELB improved by 0.049907
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.892
ELB improved by 0.049084
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.843
ELB improved by 0.0485857
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.795
ELB improved by 0.0484368
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.746
ELB improved by 0.048676
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.697
ELB improved by 0.0493577
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.646
ELB improved by 0.0505504
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.594
ELB improved by 0.0523274
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.539
ELB improved by 0.0547391
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.481
ELB improved by 0.0577566
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.42
ELB improved by 0.0611864
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.355
ELB improved by 0.0645984
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.288
ELB improved by 0.0673744
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.219
ELB improved by 0.0689728
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.15
ELB improved by 0.0692988
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.081
ELB improved by 0.0688398
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.013
ELB improved by 0.0684012
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.944
ELB improved by 0.0687097
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.874
ELB improved by 0.070223
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.8
ELB improved by 0.073183
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.723
ELB improved by 0.0777603
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.639
ELB improved by 0.0841804
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.546
ELB improved by 0.0928133
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.441
ELB improved by 0.104261
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.322
ELB improved by 0.11949
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.182
ELB improved by 0.140081
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.013
ELB improved by 0.168735
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.803
ELB improved by 0.210144
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.531
ELB improved by 0.27172
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.171
ELB improved by 0.360119
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.707
ELB improved by 0.46429
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.165
ELB improved by 0.541915
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.599
ELB improved by 0.566368
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.037
ELB improved by 0.561094
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.491
ELB improved by 0.546865
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.971
ELB improved by 0.519653
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.493
ELB improved by 0.477988
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.067
ELB improved by 0.425721
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.713
ELB improved by 0.354543
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.444
ELB improved by 0.269138
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.249
ELB improved by 0.194216
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.108
ELB improved by 0.141473
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.001
ELB improved by 0.10658
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.919
ELB improved by 0.0820342
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.857
ELB improved by 0.062764
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.81
ELB improved by 0.0467159
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.776
ELB improved by 0.0336697
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.752
ELB improved by 0.0237537
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.736
ELB improved by 0.0167065
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.724
ELB improved by 0.0119292
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.715
ELB improved by 0.00876892
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-872.415
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-598.305
ELB improved by 274.111
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-539.377
ELB improved by 58.9281
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-491.583
ELB improved by 47.7931
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-465.679
ELB improved by 25.9046
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.811
ELB improved by 9.86793
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.536
ELB improved by 4.27491
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.694
ELB improved by 2.84213
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.305
ELB improved by 2.38862
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.123
ELB improved by 2.18252
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.057
ELB improved by 2.06607
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.07
ELB improved by 1.98674
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.152
ELB improved by 1.91744
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.317
ELB improved by 1.83507
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.599
ELB improved by 1.71878
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.041
ELB improved by 1.5575
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.684
ELB improved by 1.35697
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.547
ELB improved by 1.13731
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.626
ELB improved by 0.920923
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.903
ELB improved by 0.722868
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.35
ELB improved by 0.552939
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.931
ELB improved by 0.418964
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.608
ELB improved by 0.322657
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.35
ELB improved by 0.258191
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.134
ELB improved by 0.216684
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.943
ELB improved by 0.190276
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.77
ELB improved by 0.173441
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.607
ELB improved by 0.162708
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.451
ELB improved by 0.15601
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.299
ELB improved by 0.152142
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.149
ELB improved by 0.1504
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.998
ELB improved by 0.150365
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.846
ELB improved by 0.151787
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.692
ELB improved by 0.154518
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.533
ELB improved by 0.158477
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.37
ELB improved by 0.163637
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.2
ELB improved by 0.170012
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.022
ELB improved by 0.177649
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.836
ELB improved by 0.186614
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.639
ELB improved by 0.196966
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.43
ELB improved by 0.20872
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.208
ELB improved by 0.221795
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.972
ELB improved by 0.23599
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.721
ELB improved by 0.250995
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.455
ELB improved by 0.266454
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.173
ELB improved by 0.282026
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.875
ELB improved by 0.297343
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.563
ELB improved by 0.311842
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.239
ELB improved by 0.324608
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.904
ELB improved by 0.33435
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.565
ELB improved by 0.339591
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.226
ELB improved by 0.338979
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.894
ELB improved by 0.331612
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.577
ELB improved by 0.317287
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.28
ELB improved by 0.296617
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.009
ELB improved by 0.270996
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.767
ELB improved by 0.24238
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.554
ELB improved by 0.212917
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.37
ELB improved by 0.184551
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.211
ELB improved by 0.158728
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.075
ELB improved by 0.136281
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.957
ELB improved by 0.117481
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.855
ELB improved by 0.102176
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.765
ELB improved by 0.0899543
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.685
ELB improved by 0.080288
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.612
ELB improved by 0.0726261
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.546
ELB improved by 0.0664568
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.484
ELB improved by 0.061342
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.427
ELB improved by 0.0569401
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.374
ELB improved by 0.0530194
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.325
ELB improved by 0.0494567
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.279
ELB improved by 0.0462177
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.235
ELB improved by 0.0433243
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.194
ELB improved by 0.0408194
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.156
ELB improved by 0.03874
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.119
ELB improved by 0.0371012
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.083
ELB improved by 0.0358881
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.048
ELB improved by 0.0350492
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.013
ELB improved by 0.0344912
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.979
ELB improved by 0.0340788
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.945
ELB improved by 0.0336485
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.912
ELB improved by 0.0330461
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.88
ELB improved by 0.0321831
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.849
ELB improved by 0.0310881
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.819
ELB improved by 0.0299124
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.79
ELB improved by 0.0288708
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.762
ELB improved by 0.0281404
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.734
ELB improved by 0.0277704
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.707
ELB improved by 0.0276429
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.679
ELB improved by 0.0275024
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.652
ELB improved by 0.0270457
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.626
ELB improved by 0.0260358
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.602
ELB improved by 0.0243876
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.58
ELB improved by 0.022183
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.56
ELB improved by 0.0196225
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.543
ELB improved by 0.0169528
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.529
ELB improved by 0.0144007
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.517
ELB improved by 0.0121305
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.506
ELB improved by 0.010227
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.498
ELB improved by 0.00870314
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-864.599
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-548.699
ELB improved by 315.9
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-489.082
ELB improved by 59.6173
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.797
ELB improved by 32.2853
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.485
ELB improved by 13.3113
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.401
ELB improved by 6.08452
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.349
ELB improved by 4.05204
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.954
ELB improved by 3.39446
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.737
ELB improved by 3.21753
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.504
ELB improved by 3.23317
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.212
ELB improved by 3.29144
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.917
ELB improved by 3.2954
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.745
ELB improved by 3.17217
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.855
ELB improved by 2.88981
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.363
ELB improved by 2.49141
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.292
ELB improved by 2.07094
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.6
ELB improved by 1.69216
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.24
ELB improved by 1.36031
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.173
ELB improved by 1.06662
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.35
ELB improved by 0.823747
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.709
ELB improved by 0.640994
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.199
ELB improved by 0.509609
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.783
ELB improved by 0.415614
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.435
ELB improved by 0.348494
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.133
ELB improved by 0.30193
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.861
ELB improved by 0.272373
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.603
ELB improved by 0.257861
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.346
ELB improved by 0.256896
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.079
ELB improved by 0.266529
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.801
ELB improved by 0.27838
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.527
ELB improved by 0.274102
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.289
ELB improved by 0.238079
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.105
ELB improved by 0.184069
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.966
ELB improved by 0.1383
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.858
ELB improved by 0.108791
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.767
ELB improved by 0.0910111
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.687
ELB improved by 0.0798009
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.615
ELB improved by 0.0721543
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.548
ELB improved by 0.066571
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.486
ELB improved by 0.0623109
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.427
ELB improved by 0.0589915
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.37
ELB improved by 0.0563993
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.316
ELB improved by 0.0544052
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.263
ELB improved by 0.0529251
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.211
ELB improved by 0.0519016
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.16
ELB improved by 0.0512946
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.109
ELB improved by 0.0510765
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.058
ELB improved by 0.051229
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.006
ELB improved by 0.0517415
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.953
ELB improved by 0.0526105
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.899
ELB improved by 0.0538383
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.844
ELB improved by 0.0554331
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.787
ELB improved by 0.0574085
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.727
ELB improved by 0.0597838
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.664
ELB improved by 0.0625842
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.598
ELB improved by 0.0658409
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.529
ELB improved by 0.0695913
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.455
ELB improved by 0.07388
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.376
ELB improved by 0.0787595
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.292
ELB improved by 0.0842904
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.201
ELB improved by 0.0905435
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.104
ELB improved by 0.0976006
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.998
ELB improved by 0.105557
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.884
ELB improved by 0.114527
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.759
ELB improved by 0.124645
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.623
ELB improved by 0.13608
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.474
ELB improved by 0.149047
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.31
ELB improved by 0.163829
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.129
ELB improved by 0.180805
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.929
ELB improved by 0.200474
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.705
ELB improved by 0.22344
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.455
ELB improved by 0.250236
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.174
ELB improved by 0.280811
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.861
ELB improved by 0.313526
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.516
ELB improved by 0.344171
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.15
ELB improved by 0.36653
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.775
ELB improved by 0.375242
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.406
ELB improved by 0.36854
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.058
ELB improved by 0.348451
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.738
ELB improved by 0.319243
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.453
ELB improved by 0.285685
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.201
ELB improved by 0.251775
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.981
ELB improved by 0.220194
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.788
ELB improved by 0.192386
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.62
ELB improved by 0.168898
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.47
ELB improved by 0.149707
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.335
ELB improved by 0.134445
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.213
ELB improved by 0.122503
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.1
ELB improved by 0.113087
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.995
ELB improved by 0.105297
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.896
ELB improved by 0.0983072
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.805
ELB improved by 0.0916143
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.719
ELB improved by 0.0852187
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.64
ELB improved by 0.0795877
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.564
ELB improved by 0.075363
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.492
ELB improved by 0.0728794
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.42
ELB improved by 0.0716308
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.35
ELB improved by 0.0699761
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.284
ELB improved by 0.0656483
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.227
ELB improved by 0.057313
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.181
ELB improved by 0.0459188
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.147
ELB improved by 0.0340733
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.123
ELB improved by 0.0240798
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.106
ELB improved by 0.0168178
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.094
ELB improved by 0.0120205
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.085
ELB improved by 0.00899926
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-853.053
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-569.097
ELB improved by 283.956
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-511.84
ELB improved by 57.257
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-475.782
ELB improved by 36.0582
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.906
ELB improved by 14.8756
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.986
ELB improved by 5.91988
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.187
ELB improved by 3.79922
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.759
ELB improved by 3.42833
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.076
ELB improved by 3.68283
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.787
ELB improved by 4.28876
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.632
ELB improved by 5.15565
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.602
ELB improved by 6.02954
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.26
ELB improved by 6.3419
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.603
ELB improved by 5.65759
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.347
ELB improved by 4.25581
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.536
ELB improved by 2.81086
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.728
ELB improved by 1.80806
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.467
ELB improved by 1.26109
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.466
ELB improved by 1.00103
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.567
ELB improved by 0.898298
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.689
ELB improved by 0.878323
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.787
ELB improved by 0.901753
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.837
ELB improved by 0.950384
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.82
ELB improved by 1.01722
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.721
ELB improved by 1.09862
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.533
ELB improved by 1.18833
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.257
ELB improved by 1.27599
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.908
ELB improved by 1.34857
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.52
ELB improved by 1.38815
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.149
ELB improved by 1.37133
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.868
ELB improved by 1.28107
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.745
ELB improved by 1.12219
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.823
ELB improved by 0.922458
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.105
ELB improved by 0.718068
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.567
ELB improved by 0.537558
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.173
ELB improved by 0.394233
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.885
ELB improved by 0.287903
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.674
ELB improved by 0.21156
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.516
ELB improved by 0.157207
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.398
ELB improved by 0.118381
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.308
ELB improved by 0.0904408
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.238
ELB improved by 0.0701606
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.182
ELB improved by 0.0552977
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.138
ELB improved by 0.0442884
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.102
ELB improved by 0.0360394
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.072
ELB improved by 0.0297839
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.047
ELB improved by 0.0249813
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.026
ELB improved by 0.021248
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.008
ELB improved by 0.0183099
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.992
ELB improved by 0.0159692
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.978
ELB improved by 0.014082
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.965
ELB improved by 0.0125431
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.954
ELB improved by 0.0112747
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.943
ELB improved by 0.0102189
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.934
ELB improved by 0.00933255
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.325 0.176 2.491
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.053 | 0.004 | 0.057 | |
| getPIPs | 0.075 | 0.022 | 0.097 | |
| graper | 0.083 | 0.001 | 0.084 | |
| makeExampleData | 0.01 | 0.00 | 0.01 | |
| makeExampleDataWithUnequalGroups | 0.012 | 0.000 | 0.012 | |
| plotELBO | 0.314 | 0.017 | 0.331 | |
| plotGroupPenalties | 0.956 | 0.001 | 0.957 | |
| plotPosterior | 0.649 | 0.002 | 0.652 | |
| predict.graper | 2.065 | 0.013 | 2.078 | |
| print.graper | 0.046 | 0.006 | 0.052 | |