# mrcImage2pdb

## Usage

    Usage: mrcImage2pdb
    Options:
        [-i[nput]            In                  (NULL      ).as(inFile              ) ] :Essential :InputDataFile
        [-o[utput]           Out                 (NULL      ).as(outFile             ) ] :Essential :OutputDataFile
        [-c[onfig]           configFile          (NULL      ).as(inFile              ) ] :Optional  :ConfigurationFile
        [-m[ode]             mode                (5         ).as(Integer             ) ] :Optional  :Mode
        [-hi[gh]             h                   (0         ).as(Real                ) ] :Optional  :Value of high threshold. Default is the MAX.
        [-lo[w]              l                   (0         ).as(Real                ) ] :Optional  :Value of low threshold. Default is the MIN.
        [-L[attice]                                                                    ] :Optional  :Atoms are on lattice points
        [-Skip               Skip                (1         ).as(Integer             ) ] :Optional  :Skip atoms.
        [-R[andom]           Random              (0         ).as(Real                ) ] :Optional  :Random
        [-d[elta]            delta               (0.1       ).as(Real                ) ] :Optional  :Delta to select atoms to avoid too much concentration. Requiers 0-0.5 value. For mode2-4.
    ----- Additional Usage -----
    mode0: One atom for one boxel.
    mode1: Eight atoms for one boxel.
    mode2: On the surface of high threshold. Atoms few.
    mode3: On the surface of high threshold. Atoms medium.
    mode4: On the surface of high threshold. Atoms many
    mode5 (Default) : On the surface of high threshold. Mesh mode.