# mrcImage3DPad2

## Usage

    Usage: mrcImage3DPad2
    Options:
        [-i[nput]            In                  (NULL      ).as(inFile              ) ] :Essential :InputDataFile
        [-o[utput]           Out                 (NULL      ).as(outFile             ) ] :Essential :OutputDataFile
        [-c[onfig]           configFile          (NULL      ).as(inFile              ) ] :Optional  :ConfigurationFile
        [-r[max]             r                   (0         ).as(Real                ) ] :Optional  :Threshold radius of signal.Default is Nx.
        [-w[idth]            w                   (1         ).as(Real                ) ] :Optional  :Width of slope. For mode 1.
        [-v[alue]            v                   (0         ).as(Real                ) ] :Optional  :Value of out of threshold.
        [-Nx                 Nx                  (0         ).as(Integer             ) ] :Optional  :Number of x.Default is inputfile.
        [-Ny                 Ny                  (0         ).as(Integer             ) ] :Optional  :Number of y.Default is inputfile.
        [-Nz                 Nz                  (0         ).as(Integer             ) ] :Optional  :Number of z.Default is inputfile.
        [-Floating                                                                     ] :Optional  :Floating
        [-m[ode]             mode                (0         ).as(Integer             ) ] :Optional  :Mode
        [-M[ode2]            mode2               (0         ).as(Integer             ) ] :Optional  :Mode
    ----- mode -----
    0:Default: Out of threshold is avrage of threshold plain.
    1:Mulplying cos function. Default: Out of threshold is avrage of threshold plain.
    ----- mode2 -----
    0:For filaments.  R is calculated from its axis.
    1:For particles.  R is calculated from its center.