# mrcRefCorrelation

## Usage

    Usage: mrcRefCorrelation
    Options:
        [-i[nput]            In                  (NULL      ).as(inFile              ) ] :Essential :InputDataFile
        [-r[eference]        In2                 (NULL      ).as(inFile              ) ] :Optional  :For Mode1=1 only:ReferenceDataFile
        [-o[utput]           Out                 (NULL      ).as(outFile             ) ] :Essential :OutputDataFile
        [-c[onfig]           configFile          (NULL      ).as(inFile              ) ] :Optional  :ConfigurationFile
        [-m[ode]             mode                (0         ).as(Integer             ) ] :Optional  :
     Mode1 	 0:AutoCorrelation
    	 1:CrossCorrelation
        [-M[ode]             mode2               (0         ).as(Integer             ) ] :Optional  :
     Mode2 	 0:All is to be calculated.
    	 1:Pick up at random
    	 2:Calculate only Omega=0,Alpha=0
        [-n[umber]           number              (NULL      ).as(Integer             ) ] :Optional  :For mode 1 only. Number of points to pick up at random. Defalt:Data size along z axis of inputfile / 10