7ed61faa65ed05a8cacf4d65a16331ff *DESCRIPTION
1363549731a4672604fe5d7340596c73 *NAMESPACE
fda1517b1e0a3e43480a019205299391 *NEWS.md
9bf8fc9c9c08c177701e6aefc2fb565f *R/ID-translation.R
0a129308627e69a0d107150dafb00d05 *R/TCGAbarcode.R
85c339b08bc3c3cdf5bcb5dd8becfcdd *R/TCGAbiospec.R
4e846de81c498873577278cc3fd7c5aa *R/TCGAprimaryTumors.R
96ebe1d7166cd94d0498befbd6d03478 *R/TCGAsampleSelect.R
a59088023d3db96426c49e75a271dfe7 *R/TCGAutils-pkg.R
7fa37c2c07f32b90ccd7a559501bd528 *R/builds.R
ee3ab5e16248c24283f358ae9133ebb2 *R/curatedTCGAData-helpers.R
ff57c166c18635d60b534012df4110bd *R/data.R
cf2ecdb06fce061132878e670046fe66 *R/findGRangesCols.R
f3aa58cb66a0229be6b8bef5912c4dac *R/generateMap.R
b695f572262ad48f50ebe589d63228ba *R/getFileName.R
742080c6b38cfc88e706edbe7194cfb3 *R/imputeAssay.R
de169718a891b02f401862efaf6eac5d *R/makeGRangesListFromCopyNumber.R
f626cb9c23fabdce2cba834b9abc5b2a *R/makeGRangesListFromExonFiles.R
45cd1d015766c40e440622169460afaf *R/oncoPrintTCGA.R
bb175ecee163d7758fac95b1d946f61f *R/simplifyColData.R
c62aa9dd862c618c8b9c781ed6f04971 *R/simplifyTCGA.R
b07602dc4ab73e251855c18f0041cbc3 *R/utils.R
ba54f6440ab2ef4f3f3adda2b89d63cc *README.md
fe9c8750c60294370718b458693c0cb9 *_pkgdown.yml
99dc06b04d115a8090a055658c6b07a8 *build/vignette.rds
1d9e8f8db94c4a0239cd374370c0b285 *data/clinicalNames.rda
d1de782fd93e5b3f09a78389c10aeb5f *data/diseaseCodes.rda
e328fbc555b3426a509fd87667fefdf4 *data/sampleTypes.rda
b8c43b5e5d4ff56b455384075b2d1952 *inst/doc/TCGAutils.R
faebf077a6a6880aebdcb5a3dede7ae9 *inst/doc/TCGAutils.Rmd
1289ea1171d6cd8512c58b5b9b4b616e *inst/doc/TCGAutils.html
34c28c082227e3675fc08dfa9946fa83 *inst/extdata/blca_cnaseq.R
c54b22fa45a464bb6b507abe9b63f227 *inst/extdata/blca_cnaseq.txt
5d0b2e76777583fdfbd80282736fec67 *inst/extdata/bt.exon_quant.R
872fcb685f30213e28a22c8d2ad5e636 *inst/extdata/bt.exon_quantification.txt
7c64d39dbb2d9c10844e8b11c8338b99 *inst/scripts/clinicalNames.R
6279109b0b72e08a4d7f5596f1bdf936 *inst/scripts/diseaseCodes.R
c9593a603263adaaf07d39dc3a72f066 *inst/scripts/sampleTypes.R
81bb2b825c232691f0b5603f8254038a *man/ID-translation.Rd
8542c406a3bb1b99b064d3ea684cde29 *man/TCGAbarcode.Rd
8a092202468dd7670149d3fa610301c7 *man/TCGAbiospec.Rd
5f825e81171d23b7362812ca454f0713 *man/TCGAprimaryTumors.Rd
2dfaa32dc8d329a08312f23db886a13b *man/TCGAsampleSelect.Rd
af60fdb2cc5c128b643dcf78cf43054a *man/TCGAutils-package.Rd
5beff7a2757c78ae3960fda0910fcf80 *man/builds.Rd
1b90544eb992c906a79fb98079996cb5 *man/clinicalNames.Rd
6070328ad633b4a4d642ff210443b225 *man/curatedTCGAData-helpers.Rd
1105fc919e41cb31a71888d439294bdf *man/diseaseCodes.Rd
2997f523f8b645e94bb71955033d599b *man/findGRangesCols.Rd
54b911c24d1e2222c4bd33017d9baefd *man/generateMap.Rd
95ec9206bee028e5eaea3b656aabbe4c *man/getFileName.Rd
d9e7b46bad80cf2d6e542622efda0cfb *man/hidden-helpers.Rd
04a8247b1dca3effeea3c5f821c53431 *man/imputeAssay.Rd
004a32d8b19e388d4e89ed684a0a7b83 *man/makeGRangesListFromCopyNumber.Rd
1820a104504d05fb81b4d02249a2312c *man/makeGRangesListFromExonFiles.Rd
f728d29c2338982a8752df7ff7c7e7fe *man/mergeColData.Rd
1e81da0b471941547b942a5840663b27 *man/oncoPrintTCGA.Rd
d9078f1e9e51827c89bf6aef916900f0 *man/sampleTypes.Rd
20acc1d6630676215de1f7868dde4632 *man/simplifyTCGA-defunct.Rd
6f102bb05bdb6cca41f9eb9000b98ed6 *man/simplifyTCGA.Rd
803a4e7a73f67fe5f27d8313299b30bf *man/trimColData.Rd
0d5fb0ea2161885c67815d83df5ad361 *tests/testthat.R
9fc6f51b311660a3399e0c4d984daecc *tests/testthat/test-ID-translation.R
ba1d7b6ad560b8846278e17f0af93411 *tests/testthat/test-builds.R
36ef04ceb7727effe51c87fdc1bff6c7 *tests/testthat/test-identifiers.R
faebf077a6a6880aebdcb5a3dede7ae9 *vignettes/TCGAutils.Rmd
