f73db634cafb822208e559beea46dacc *DESCRIPTION
ad6f111f39b47b34c7ae9ba6dd64677a *NAMESPACE
8db44c9727ee0fcc71c45812204d1236 *NEWS.md
49b1082889a9e167444f20f779d5ae88 *R/DaparToolshed-filterFeaturesOneSE.R
14a007ad6b121226e5f29186cd39d956 *R/DaparToolshed_Params_Addons.R
a2db20525ee6be30c2a5ec248c05c722 *R/DaparToolshed_QFeatures_Addons.R
d7245c1f604ac8d0eac5b3b4d077c540 *R/DaparToolshed_filter_Adjmat.R
e1a11df092bd61f43cf165a2ff5dcb3c *R/DaparToolshed_filter_qMetadata.R
84ec8822f5d2cabde1e290c8ed8347b6 *R/DiffAnalysis.R
4776c638831a16d3acc683885b3cbe4a *R/QFeatures_utils.R
cc879ef07fbebc9e76e2ba01cf49140e *R/adjacencyMatrix.R
68232f3a5ffcb11870a653b939275e63 *R/aggregation.R
b1217e743cb4b3d56f53042cd8115d06 *R/anova_analysis.R
3ac559fe0e638cdb1b7703e78d9e0ffe *R/compute.t.tests.R
050c8ad6f2511c8c3a130f17ef93d64b *R/doc-data.R
ca13d25d04571056d9fc24bd73f7d088 *R/export_qfeatures.R
cb0500b40ca4b3639d1422825613f916 *R/funcs_FunctionFiltering.R
37af3ff43a44b70100b4a3e57f01e2b3 *R/funcs_normalize.R
13c6fced78c4a43031740863ad6a59fc *R/get_pep_prot_cc.R
e0a23aa8cfe018ba6da9ba9e2c073369 *R/global.R
9d458aae86719aeb92f23ce8075b6c5d *R/heatmap.R
50d2c3c00f69fb6203c8795c384212b4 *R/history_utils.R
22f22c60544eaa274c6edc9d26a81fea *R/hypothesisTest_plot.R
1f3e4a8ae6a9d1cb5c0d126d6f386f5c *R/import_2_qfeatures.R
38be23eca4c97fa78f3feba374c6ce5a *R/initialization.R
6410e00d8c0973271ec6776baa166de6 *R/limmaAnalysis.R
152584d86d57970c1d2fa72320a748fa *R/metacell.R
54c1ba84022a7b0c177eab5f11d5e033 *R/missingValuesImputation_PeptideLevel.R
fc546d9c154a03965e195c29b72bec64 *R/missingValuesImputation_ProteinLevel.R
3529ce8eee16ed73a7773b77d8e03722 *R/output2Excel.R
9b2bf3bcac87f6a6455a91ca80bcb515 *R/palette.R
0934d1df229254ad79ac1eb8ca092eed *R/pepa.R
6f5dfadd4e6c8d4ec2e14f191a7b8ac2 *R/plot_metacell.R
2f74be62a661d5fcf6708a066ac1518c *R/plots_compare_assays.R
90ded52fdb48bca15b0bcde1589d3881 *R/plots_normalization.R
75b02ef7f0c38880dc38528d6d8fe304 *R/plots_volcano.R
34b72856144f14ecd90a57a78ec9ae18 *R/shinyValue.R
c96a1abaf399534bfaee9ce9d7f22994 *R/utils.R
5e8ce0f943f3734b3f28add9b86adfd0 *README.md
6c9b08d0f59da3aa440e36234b0de6f3 *build/vignette.rds
c20e2bec2386306b6ec346175416d4f1 *data/datalist
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3fe33f19285a756677bfb9e31766e2c4 *data/subR25prot.RData
164769a76fbc06b9461a624904525841 *inst/doc/DaparToolshed.R
b4e252d89d0e4ff82d3b9145e78e1be0 *inst/doc/DaparToolshed.Rmd
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5ec369613190abbff7b69fa7ad7038c3 *inst/extdata/data/Exp1_R25_pept_100.txt
9e4d31af5046f67c1dd484a47ad8e380 *inst/extdata/data/Exp1_R25_prot_100.txt
3b2cb59849a7df3abce8ee8b9757273b *inst/extdata/data/samples_Exp1_R25.txt
455b9c69aec6064a7c4e8b2b3cadfa32 *inst/extdata/examples/ex_BuildColumnToProteinDataset.R
d4a68c147e01e830e4c9529f7b132b8d *inst/extdata/examples/ex_BuildMetacell.R
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7438e7e86beaf266e281671ce7606578 *inst/extdata/examples/ex_design_example.R
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37e5970266bc5d419987685f0dc8b0f4 *man/Children.Rd
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74c27b5bf6e55d23508f8deb22d9eb1f *man/DaparToolshed-aggregate.Rd
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2ec9dd441845aaa9445c863cc3917d35 *man/GetSoftAvailables.Rd
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0f8f50644ac974273c3a05fc3696f2c9 *man/LH1.Rd
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9cf51c6e6206e45389a43f806d3d3076 *man/OWAnova.Rd
7602e8e17b2a2a6e1904082ced41675f *man/Parent.Rd
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3c53f9057a5968662d5707b09a0d0ee1 *man/classic1wayAnova.Rd
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42bb1981b8260d3583f9750623d3bbe5 *man/diffAnaVolcanoplot_rCharts.Rd
06dc8a01a0173f4193e013fddf2b1570 *man/displayCCvisNet.Rd
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6db05fd47227b1ba433fedcce2102129 *man/formatLimmaResult.Rd
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9111e69495ed61afbe3ba2c2a823cd35 *man/formatPHTResults.Rd
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20b7bf03536a9912fdc2158f919ff1fe *man/getDesignLevel.Rd
3a31b281d7f9ee5b4ff1d2f31a937d8e *man/getListNbValuesInLines.Rd
80e8357356204b640f447c0b734c66fe *man/getNumberOfEmptyLines.Rd
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4201be7658982f8409ff8cbd85d7165d *man/hc_logFC_DensityPlot.Rd
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48ac7ca74eb92014416e3973e5d2dcf8 *man/histPValue_HC.Rd
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0e66635c689e28eea1161a23ed9b7b8d *man/isOfType.Rd
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8a48b18ae798e63b2b819bd0508a5155 *man/normalizeFunction.Rd
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4bf82db4b0cd662dadd923b8804b30b7 *man/postHocTest.Rd
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b8e55868de23c2d653597111403c1ebd *man/qMetacell-filter.Rd
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466193ad634cc5faf715e7ab35516c5b *man/translatedRandomBeta.Rd
c2fe858d7e018ed67733a3d1c85a22c5 *man/wrapperCalibrationPlot.Rd
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8736e41e01414bf18e23740849c6def7 *man/wrapperImputeMLE.Rd
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70892ac7349f45bb88a8612b3f941540 *tests/testthat.R
14a6c66515cc805ef8ae5a93c1b65ec9 *tests/testthat/test_plot.R
bdaec19cac8071da48720405f2ee4295 *tests/testthat/test_preproc.R
73ca0ad2ffa575cd16726dd41be449d6 *tests/testthat/test_statstest.R
b4e252d89d0e4ff82d3b9145e78e1be0 *vignettes/DaparToolshed.Rmd
0d7ffb50f742a9bdaeb73ce085063bdd *vignettes/references.bib
