rnohomologyHGID         package:rnohomology         R Documentation

_A _v_e_c_t_o_r _c_o_n_t_a_i_n_i_n_g _a_l_l _t_h_e _H_o_m_o_l_o_G_e_n_e_I_D_s _f_o_r _R_a_t_t_u_s _n_o_r_v_e_g_i_c_u_s

_D_e_s_c_r_i_p_t_i_o_n:

     rnohomologyHGID is a vector containing all the HomoloGeneIDs for
     Rattus norvegicus. A HomoloGeneID is a unique identifier used by
     NCBI to represent a sequence in a given organism

_D_e_t_a_i_l_s:

     The HomoloGeneIDs can be used to obtain data for all the
     homologous genes in other organisms using the environment
     rnohomologyDATA.

     rnohomologyDATA is an R environment that maps HomoloGeneIds from
     Rattus norvegicus to other species. Consult the rnohomologyDATA
     help page for more information.

     Mappings contained in homology10116 were based on data provided by
     HomoloGene.

     HomoloGene:<URL: 
     ftp://ftp.ncbi.nih.gov/pub/HomoloGene/old/hmlg.ftp>. Built:
     HomoloGene built date not available

     Packagebuilt Tue Oct  4 20:04:40 2005

_R_e_f_e_r_e_n_c_e_s:

     <URL: http://www.ncbi.nih.gov/entrez/query.fcgi?db=homologene>

_E_x_a_m_p_l_e_s:

         require("annotate") || stop("annotate unavailable")
         get(rnohomologyHGID[1], rnohomologyDATA)

